Download Instructions

Contents

Introduction

There are two packages present here. Fungimol is a graphical package written in C++ as described elsewhere. Brennermd is a Fortran molecular dynamics program by Donald Brenner and company. Fungimol uses Brennermd. To make Fungimol a standalone package, the Fungimol package includes everything in the Brennermd package. Since the Brennermd package is a self-contained piece of code that I didn't write any of, we still have it as a separate package here.

Thus, in brief, you may want to install Fungimol, or you may want to install Brennermd, but you don't want to install both.

Installing Fungimol

To download and install Fungimol, do the following:

All of these procedures install the new fungimol and brennermd executables in /usr/bin, and the documents in /usr/doc/fungimol-0.3.4/index.html.

Installing Brennermd

As discussed above, if you've installed Fungimol, you already have Brennermd so you don't need to install it.

To install Brennermd without Fungimol, do the following:


Copyright 2000 Tim Freeman <tim@infoscreen.com>