Last updated on 2024-11-19 09:50:19 CET.
| Package | ERROR | OK |
|---|---|---|
| MBNMAdose | 9 | 4 |
| MBNMAtime | 9 | 4 |
Current CRAN status: ERROR: 9, OK: 4
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23949 bytes
Input file size = 24831 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20085
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20078
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18728
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18662
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18662
Output IDAT size = 18662 bytes (5287 bytes decrease)
Output file size = 18740 bytes (6091 bytes = 24.53% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73980 bytes
Input file size = 74166 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68219
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66929
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66929
Output IDAT size = 66929 bytes (7051 bytes decrease)
Output file size = 67007 bytes (7159 bytes = 9.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84126 bytes
Input file size = 84324 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72400
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 72400
Output IDAT size = 72400 bytes (11726 bytes decrease)
Output file size = 72478 bytes (11846 bytes = 14.05% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60569 bytes
Input file size = 60731 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 55897
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54825
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 54825
Output IDAT size = 54825 bytes (5744 bytes decrease)
Output file size = 54903 bytes (5828 bytes = 9.60% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59748 bytes
Input file size = 59910 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53446
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53446
Output IDAT size = 53446 bytes (6302 bytes decrease)
Output file size = 53524 bytes (6386 bytes = 10.66% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65601 bytes
Input file size = 65775 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57331
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57331
Output IDAT size = 57331 bytes (8270 bytes decrease)
Output file size = 57409 bytes (8366 bytes = 12.72% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 114632 bytes
Input file size = 114866 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94978
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94978
Output IDAT size = 94978 bytes (19654 bytes decrease)
Output file size = 95056 bytes (19810 bytes = 17.25% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100393 bytes
Input file size = 100615 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85778
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85778
Output IDAT size = 85778 bytes (14615 bytes decrease)
Output file size = 85856 bytes (14759 bytes = 14.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 127996 bytes
Input file size = 128254 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103918
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103918
Output IDAT size = 103918 bytes (24078 bytes decrease)
Output file size = 103996 bytes (24258 bytes = 18.91% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46783 bytes
Input file size = 46921 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42774
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42774
Output IDAT size = 42774 bytes (4009 bytes decrease)
Output file size = 42852 bytes (4069 bytes = 8.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129022 bytes
Input file size = 129280 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
Output IDAT size = 99221 bytes (29801 bytes decrease)
Output file size = 99299 bytes (29981 bytes = 23.19% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 24823 bytes
Input file size = 25717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20897
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20885
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 19898
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19841
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 19841
Output IDAT size = 19841 bytes (4982 bytes decrease)
Output file size = 19919 bytes (5798 bytes = 22.55% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73607 bytes
Input file size = 73781 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 67926
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66628
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66628
Output IDAT size = 66628 bytes (6979 bytes decrease)
Output file size = 66706 bytes (7075 bytes = 9.59% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 85014 bytes
Input file size = 85212 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73957
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73957
Output IDAT size = 73957 bytes (11057 bytes decrease)
Output file size = 74035 bytes (11177 bytes = 13.12% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61011 bytes
Input file size = 61173 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56527
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55176
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55176
Output IDAT size = 55176 bytes (5835 bytes decrease)
Output file size = 55254 bytes (5919 bytes = 9.68% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61030 bytes
Input file size = 61192 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53906
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53906
Output IDAT size = 53906 bytes (7124 bytes decrease)
Output file size = 53984 bytes (7208 bytes = 11.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60579 bytes
Input file size = 60741 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53760
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53760
Output IDAT size = 53760 bytes (6819 bytes decrease)
Output file size = 53838 bytes (6903 bytes = 11.36% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 117298 bytes
Input file size = 117544 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97131
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 97131
Output IDAT size = 97131 bytes (20167 bytes decrease)
Output file size = 97209 bytes (20335 bytes = 17.30% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99852 bytes
Input file size = 100074 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85044
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85044
Output IDAT size = 85044 bytes (14808 bytes decrease)
Output file size = 85122 bytes (14952 bytes = 14.94% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128465 bytes
Input file size = 128723 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104146
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104146
Output IDAT size = 104146 bytes (24319 bytes decrease)
Output file size = 104224 bytes (24499 bytes = 19.03% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 47046 bytes
Input file size = 47184 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42948
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42948
Output IDAT size = 42948 bytes (4098 bytes decrease)
Output file size = 43026 bytes (4158 bytes = 8.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129148 bytes
Input file size = 129406 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99233
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99233
Output IDAT size = 99233 bytes (29915 bytes decrease)
Output file size = 99311 bytes (30095 bytes = 23.26% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 27077 bytes
Input file size = 27971 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20203
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20175
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18481
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18383
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18383
Output IDAT size = 18383 bytes (8694 bytes decrease)
Output file size = 18461 bytes (9510 bytes = 34.00% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73803 bytes
Input file size = 73989 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68254
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66767
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66767
Output IDAT size = 66767 bytes (7036 bytes decrease)
Output file size = 66845 bytes (7144 bytes = 9.66% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84918 bytes
Input file size = 85116 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73506
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73506
Output IDAT size = 73506 bytes (11412 bytes decrease)
Output file size = 73584 bytes (11532 bytes = 13.55% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 62072 bytes
Input file size = 62234 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56899
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55923
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55923
Output IDAT size = 55923 bytes (6149 bytes decrease)
Output file size = 56001 bytes (6233 bytes = 10.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64945 bytes
Input file size = 65107 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56752
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56752
Output IDAT size = 56752 bytes (8193 bytes decrease)
Output file size = 56830 bytes (8277 bytes = 12.71% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60927 bytes
Input file size = 61089 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53923
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53923
Output IDAT size = 53923 bytes (7004 bytes decrease)
Output file size = 54001 bytes (7088 bytes = 11.60% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 114084 bytes
Input file size = 114318 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94314
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94314
Output IDAT size = 94314 bytes (19770 bytes decrease)
Output file size = 94392 bytes (19926 bytes = 17.43% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100516 bytes
Input file size = 100738 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85481
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85481
Output IDAT size = 85481 bytes (15035 bytes decrease)
Output file size = 85559 bytes (15179 bytes = 15.07% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 127534 bytes
Input file size = 127792 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103402
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103402
Output IDAT size = 103402 bytes (24132 bytes decrease)
Output file size = 103480 bytes (24312 bytes = 19.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46848 bytes
Input file size = 46986 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42810
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42810
Output IDAT size = 42810 bytes (4038 bytes decrease)
Output file size = 42888 bytes (4098 bytes = 8.72% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129077 bytes
Input file size = 129335 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99274
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99274
Output IDAT size = 99274 bytes (29803 bytes decrease)
Output file size = 99352 bytes (29983 bytes = 23.18% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 25135 bytes
Input file size = 26029 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21234
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 21229
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 20247
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20134
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20134
Output IDAT size = 20134 bytes (5001 bytes decrease)
Output file size = 20212 bytes (5817 bytes = 22.35% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73880 bytes
Input file size = 74066 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68240
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66801
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66801
Output IDAT size = 66801 bytes (7079 bytes decrease)
Output file size = 66879 bytes (7187 bytes = 9.70% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84594 bytes
Input file size = 84792 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73445
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73445
Output IDAT size = 73445 bytes (11149 bytes decrease)
Output file size = 73523 bytes (11269 bytes = 13.29% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61163 bytes
Input file size = 61325 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56539
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55242
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55242
Output IDAT size = 55242 bytes (5921 bytes decrease)
Output file size = 55320 bytes (6005 bytes = 9.79% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59783 bytes
Input file size = 59945 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53219
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53219
Output IDAT size = 53219 bytes (6564 bytes decrease)
Output file size = 53297 bytes (6648 bytes = 11.09% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60695 bytes
Input file size = 60857 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53819
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53819
Output IDAT size = 53819 bytes (6876 bytes decrease)
Output file size = 53897 bytes (6960 bytes = 11.44% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 117054 bytes
Input file size = 117300 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 96902
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 96902
Output IDAT size = 96902 bytes (20152 bytes decrease)
Output file size = 96980 bytes (20320 bytes = 17.32% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100242 bytes
Input file size = 100464 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85238
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 85238
Output IDAT size = 85238 bytes (15004 bytes decrease)
Output file size = 85316 bytes (15148 bytes = 15.08% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128136 bytes
Input file size = 128394 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103470
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103470
Output IDAT size = 103470 bytes (24666 bytes decrease)
Output file size = 103548 bytes (24846 bytes = 19.35% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46706 bytes
Input file size = 46844 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42662
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42662
Output IDAT size = 42662 bytes (4044 bytes decrease)
Output file size = 42740 bytes (4104 bytes = 8.76% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129142 bytes
Input file size = 129400 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99237
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99237
Output IDAT size = 99237 bytes (29905 bytes decrease)
Output file size = 99315 bytes (30085 bytes = 23.25% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'consistencychecking-3.Rmd' using rmarkdown
--- finished re-building 'consistencychecking-3.Rmd'
--- re-building 'dataexploration-1.Rmd' using rmarkdown
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'dataexploration-1.Rmd'
--- re-building 'mbnmadose-overview.Rmd' using rmarkdown
--- finished re-building 'mbnmadose-overview.Rmd'
--- re-building 'metaregression-6.Rmd' using rmarkdown
--- finished re-building 'metaregression-6.Rmd'
--- re-building 'nma_in_mbnmadose.Rmd' using rmarkdown
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'nma_in_mbnmadose.Rmd'
--- re-building 'outputs-4.Rmd' using rmarkdown
--- finished re-building 'outputs-4.Rmd'
--- re-building 'predictions-5.Rmd' using rmarkdown
--- finished re-building 'predictions-5.Rmd'
--- re-building 'runmbnmadose-2.Rmd' using rmarkdown
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'runmbnmadose-2.Rmd'
SUMMARY: processing the following files failed:
'dataexploration-1.Rmd' 'nma_in_mbnmadose.Rmd' 'runmbnmadose-2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 24886 bytes
Input file size = 25780 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21120
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 20393
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20279
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 20279
Output IDAT size = 20279 bytes (4607 bytes decrease)
Output file size = 20357 bytes (5423 bytes = 21.04% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73754 bytes
Input file size = 73940 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68112
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66668
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66668
Output IDAT size = 66668 bytes (7086 bytes decrease)
Output file size = 66746 bytes (7194 bytes = 9.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 82424 bytes
Input file size = 82622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71851
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 71851
Output IDAT size = 71851 bytes (10573 bytes decrease)
Output file size = 71929 bytes (10693 bytes = 12.94% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 63388 bytes
Input file size = 63550 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58173
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 57077
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 57077
Output IDAT size = 57077 bytes (6311 bytes decrease)
Output file size = 57155 bytes (6395 bytes = 10.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 54976 bytes
Input file size = 55126 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 50253
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 50113
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 50113
Output IDAT size = 50113 bytes (4863 bytes decrease)
Output file size = 50191 bytes (4935 bytes = 8.95% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 50886 bytes
Input file size = 51036 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46887
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46265
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 46265
Output IDAT size = 46265 bytes (4621 bytes decrease)
Output file size = 46343 bytes (4693 bytes = 9.20% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 116164 bytes
Input file size = 116410 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95877
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95877
Output IDAT size = 95877 bytes (20287 bytes decrease)
Output file size = 95955 bytes (20455 bytes = 17.57% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 100988 bytes
Input file size = 101210 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 86086
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 86086
Output IDAT size = 86086 bytes (14902 bytes decrease)
Output file size = 86164 bytes (15046 bytes = 14.87% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128881 bytes
Input file size = 129139 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104430
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104430
Output IDAT size = 104430 bytes (24451 bytes decrease)
Output file size = 104508 bytes (24631 bytes = 19.07% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46282 bytes
Input file size = 46420 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42367
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42367
Output IDAT size = 42367 bytes (3915 bytes decrease)
Output file size = 42445 bytes (3975 bytes = 8.56% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129119 bytes
Input file size = 129377 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99259
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99259
Output IDAT size = 99259 bytes (29860 bytes decrease)
Output file size = 99337 bytes (30040 bytes = 23.22% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.4.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-3-1.png
1344x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 23534 bytes
Input file size = 24416 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20020
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 20004
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18659
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18597
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 18597
Output IDAT size = 18597 bytes (4937 bytes decrease)
Output file size = 18675 bytes (5741 bytes = 23.51% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-2-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 218046 bytes
Input file size = 218436 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 160681
Output IDAT size = 160681 bytes (57365 bytes decrease)
Output file size = 160759 bytes (57677 bytes = 26.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-4-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 144160 bytes
Input file size = 144442 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 108770
Output IDAT size = 108770 bytes (35390 bytes decrease)
Output file size = 108848 bytes (35594 bytes = 24.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43024 bytes
Input file size = 43162 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34497
Output IDAT size = 34497 bytes (8527 bytes decrease)
Output file size = 34575 bytes (8587 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34591 bytes
Input file size = 34717 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28108
Output IDAT size = 28108 bytes (6483 bytes decrease)
Output file size = 28186 bytes (6531 bytes = 18.81% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 157316 bytes
Input file size = 157622 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 120267
Output IDAT size = 120267 bytes (37049 bytes decrease)
Output file size = 120345 bytes (37277 bytes = 23.65% decrease)
Quitting from lines 198-202 [unnamed-chunk-9] (dataexploration-1.Rmd)
Error: processing vignette 'dataexploration-1.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmadose-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmadose-overview.Rmd’
--- re-building ‘metaregression-6.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 73827 bytes
Input file size = 74013 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 68262
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66800
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 66800
Output IDAT size = 66800 bytes (7027 bytes decrease)
Output file size = 66878 bytes (7135 bytes = 9.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/metaregression-6_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 84241 bytes
Input file size = 84439 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73150
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 73150
Output IDAT size = 73150 bytes (11091 bytes decrease)
Output file size = 73228 bytes (11211 bytes = 13.28% decrease)
--- finished re-building ‘metaregression-6.Rmd’
--- re-building ‘nma_in_mbnmadose.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/nma_in_mbnmadose_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16137 bytes
Input file size = 16227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13294
Output IDAT size = 13294 bytes (2843 bytes decrease)
Output file size = 13372 bytes (2855 bytes = 17.59% decrease)
Quitting from lines 74-75 [unnamed-chunk-4] (nma_in_mbnmadose.Rmd)
Error: processing vignette 'nma_in_mbnmadose.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘nma_in_mbnmadose.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61048 bytes
Input file size = 61210 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56444
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55156
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 55156
Output IDAT size = 55156 bytes (5892 bytes decrease)
Output file size = 55234 bytes (5976 bytes = 9.76% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60512 bytes
Input file size = 60674 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53589
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53589
Output IDAT size = 53589 bytes (6923 bytes decrease)
Output file size = 53667 bytes (7007 bytes = 11.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-8-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 65918 bytes
Input file size = 66092 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57439
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57439
Output IDAT size = 57439 bytes (8479 bytes decrease)
Output file size = 57517 bytes (8575 bytes = 12.97% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/outputs-4_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 115530 bytes
Input file size = 115776 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95750
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 95750
Output IDAT size = 95750 bytes (19780 bytes decrease)
Output file size = 95828 bytes (19948 bytes = 17.23% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-6-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99914 bytes
Input file size = 100136 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84917
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 84917
Output IDAT size = 84917 bytes (14997 bytes decrease)
Output file size = 84995 bytes (15141 bytes = 15.12% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 128096 bytes
Input file size = 128354 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103417
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 103417
Output IDAT size = 103417 bytes (24679 bytes decrease)
Output file size = 103495 bytes (24859 bytes = 19.37% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46993 bytes
Input file size = 47131 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 42863
Output IDAT size = 42863 bytes (4130 bytes decrease)
Output file size = 42941 bytes (4190 bytes = 8.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129168 bytes
Input file size = 129426 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 99221
Output IDAT size = 99221 bytes (29947 bytes decrease)
Output file size = 99299 bytes (30127 bytes = 23.28% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmadose-2.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-13-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 101206 bytes
Input file size = 101428 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 78412
Output IDAT size = 78412 bytes (22794 bytes decrease)
Output file size = 78490 bytes (22938 bytes = 22.62% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-14-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33742 bytes
Input file size = 33868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26932
Output IDAT size = 26932 bytes (6810 bytes decrease)
Output file size = 27010 bytes (6858 bytes = 20.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-1.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34220 bytes
Input file size = 34346 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28128
Output IDAT size = 28128 bytes (6092 bytes decrease)
Output file size = 28206 bytes (6140 bytes = 17.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAdose.Rcheck/vign_test/MBNMAdose/vignettes/runmbnmadose-2_files/figure-html/unnamed-chunk-15-2.png
1344x960 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31005 bytes
Input file size = 31119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25151
Output IDAT size = 25151 bytes (5854 bytes decrease)
Output file size = 25229 bytes (5890 bytes = 18.93% decrease)
Quitting from lines 721-722 [unnamed-chunk-16] (runmbnmadose-2.Rmd)
Error: processing vignette 'runmbnmadose-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmadose-2.Rmd’
SUMMARY: processing the following files failed:
‘dataexploration-1.Rmd’ ‘nma_in_mbnmadose.Rmd’ ‘runmbnmadose-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64
Current CRAN status: ERROR: 9, OK: 4
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33676 bytes
Input file size = 33802 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
Output IDAT size = 26019 bytes (7657 bytes decrease)
Output file size = 26097 bytes (7705 bytes = 22.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79747 bytes
Input file size = 79933 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
Output IDAT size = 57953 bytes (21794 bytes decrease)
Output file size = 58031 bytes (21902 bytes = 27.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 87474 bytes
Input file size = 87672 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 64838
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 64838
Output IDAT size = 64838 bytes (22636 bytes decrease)
Output file size = 64916 bytes (22756 bytes = 25.96% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 91431 bytes
Input file size = 91641 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65955
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65955
Output IDAT size = 65955 bytes (25476 bytes decrease)
Output file size = 66033 bytes (25608 bytes = 27.94% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20485 bytes
Input file size = 20587 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17208
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17208
Output IDAT size = 17208 bytes (3277 bytes decrease)
Output file size = 17286 bytes (3301 bytes = 16.03% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59923 bytes
Input file size = 60085 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43750
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43750
Output IDAT size = 43750 bytes (16173 bytes decrease)
Output file size = 43828 bytes (16257 bytes = 27.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81714 bytes
Input file size = 81900 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62089
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62089
Output IDAT size = 62089 bytes (19625 bytes decrease)
Output file size = 62167 bytes (19733 bytes = 24.09% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 67117 bytes
Input file size = 67291 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53173
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53173
Output IDAT size = 53173 bytes (13944 bytes decrease)
Output file size = 53251 bytes (14040 bytes = 20.86% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31433 bytes
Input file size = 31547 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24315
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24315
Output IDAT size = 24315 bytes (7118 bytes decrease)
Output file size = 24393 bytes (7154 bytes = 22.68% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 74948 bytes
Input file size = 75134 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57831
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57831
Output IDAT size = 57831 bytes (17117 bytes decrease)
Output file size = 57909 bytes (17225 bytes = 22.93% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 48926 bytes
Input file size = 49064 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37019
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37019
Output IDAT size = 37019 bytes (11907 bytes decrease)
Output file size = 37097 bytes (11967 bytes = 24.39% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33676 bytes
Input file size = 33802 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
Output IDAT size = 26019 bytes (7657 bytes decrease)
Output file size = 26097 bytes (7705 bytes = 22.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79747 bytes
Input file size = 79933 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
Output IDAT size = 57953 bytes (21794 bytes decrease)
Output file size = 58031 bytes (21902 bytes = 27.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 88596 bytes
Input file size = 88794 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65385
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65385
Output IDAT size = 65385 bytes (23211 bytes decrease)
Output file size = 65463 bytes (23331 bytes = 26.28% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 91711 bytes
Input file size = 91921 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66910
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66910
Output IDAT size = 66910 bytes (24801 bytes decrease)
Output file size = 66988 bytes (24933 bytes = 27.12% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20661 bytes
Input file size = 20763 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17248
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17248
Output IDAT size = 17248 bytes (3413 bytes decrease)
Output file size = 17326 bytes (3437 bytes = 16.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 60223 bytes
Input file size = 60385 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42974
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42974
Output IDAT size = 42974 bytes (17249 bytes decrease)
Output file size = 43052 bytes (17333 bytes = 28.70% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81727 bytes
Input file size = 81913 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62050
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 62050
Output IDAT size = 62050 bytes (19677 bytes decrease)
Output file size = 62128 bytes (19785 bytes = 24.15% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 66933 bytes
Input file size = 67107 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52989
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52989
Output IDAT size = 52989 bytes (13944 bytes decrease)
Output file size = 53067 bytes (14040 bytes = 20.92% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31292 bytes
Input file size = 31406 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24143
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24143
Output IDAT size = 24143 bytes (7149 bytes decrease)
Output file size = 24221 bytes (7185 bytes = 22.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 75501 bytes
Input file size = 75687 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58448
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58448
Output IDAT size = 58448 bytes (17053 bytes decrease)
Output file size = 58526 bytes (17161 bytes = 22.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 55128 bytes
Input file size = 55278 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41665
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41665
Output IDAT size = 41665 bytes (13463 bytes decrease)
Output file size = 41743 bytes (13535 bytes = 24.49% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33681 bytes
Input file size = 33807 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
Output IDAT size = 26014 bytes (7667 bytes decrease)
Output file size = 26092 bytes (7715 bytes = 22.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79749 bytes
Input file size = 79935 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
Output IDAT size = 57952 bytes (21797 bytes decrease)
Output file size = 58030 bytes (21905 bytes = 27.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 87484 bytes
Input file size = 87682 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65949
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65949
Output IDAT size = 65949 bytes (21535 bytes decrease)
Output file size = 66027 bytes (21655 bytes = 24.70% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 92190 bytes
Input file size = 92400 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66682
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66682
Output IDAT size = 66682 bytes (25508 bytes decrease)
Output file size = 66760 bytes (25640 bytes = 27.75% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20197 bytes
Input file size = 20299 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17128
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17128
Output IDAT size = 17128 bytes (3069 bytes decrease)
Output file size = 17206 bytes (3093 bytes = 15.24% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59967 bytes
Input file size = 60129 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43728
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 43728
Output IDAT size = 43728 bytes (16239 bytes decrease)
Output file size = 43806 bytes (16323 bytes = 27.15% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81774 bytes
Input file size = 81960 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61986
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61986
Output IDAT size = 61986 bytes (19788 bytes decrease)
Output file size = 62064 bytes (19896 bytes = 24.28% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 66893 bytes
Input file size = 67067 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52538
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52538
Output IDAT size = 52538 bytes (14355 bytes decrease)
Output file size = 52616 bytes (14451 bytes = 21.55% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31216 bytes
Input file size = 31330 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23915
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23915
Output IDAT size = 23915 bytes (7301 bytes decrease)
Output file size = 23993 bytes (7337 bytes = 23.42% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 75694 bytes
Input file size = 75880 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58756
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58756
Output IDAT size = 58756 bytes (16938 bytes decrease)
Output file size = 58834 bytes (17046 bytes = 22.46% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 56490 bytes
Input file size = 56640 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42746
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42746
Output IDAT size = 42746 bytes (13744 bytes decrease)
Output file size = 42824 bytes (13816 bytes = 24.39% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33681 bytes
Input file size = 33807 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26014
Output IDAT size = 26014 bytes (7667 bytes decrease)
Output file size = 26092 bytes (7715 bytes = 22.82% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79749 bytes
Input file size = 79935 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57952
Output IDAT size = 57952 bytes (21797 bytes decrease)
Output file size = 58030 bytes (21905 bytes = 27.40% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 88559 bytes
Input file size = 88757 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65299
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65299
Output IDAT size = 65299 bytes (23260 bytes decrease)
Output file size = 65377 bytes (23380 bytes = 26.34% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 91993 bytes
Input file size = 92203 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66192
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66192
Output IDAT size = 66192 bytes (25801 bytes decrease)
Output file size = 66270 bytes (25933 bytes = 28.13% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20683 bytes
Input file size = 20785 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17220
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17220
Output IDAT size = 17220 bytes (3463 bytes decrease)
Output file size = 17298 bytes (3487 bytes = 16.78% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 57868 bytes
Input file size = 58030 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41632
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41632
Output IDAT size = 41632 bytes (16236 bytes decrease)
Output file size = 41710 bytes (16320 bytes = 28.12% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81661 bytes
Input file size = 81847 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61991
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61991
Output IDAT size = 61991 bytes (19670 bytes decrease)
Output file size = 62069 bytes (19778 bytes = 24.16% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 67106 bytes
Input file size = 67280 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53125
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53125
Output IDAT size = 53125 bytes (13981 bytes decrease)
Output file size = 53203 bytes (14077 bytes = 20.92% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31472 bytes
Input file size = 31586 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24275
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24275
Output IDAT size = 24275 bytes (7197 bytes decrease)
Output file size = 24353 bytes (7233 bytes = 22.90% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 74880 bytes
Input file size = 75066 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57814
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57814
Output IDAT size = 57814 bytes (17066 bytes decrease)
Output file size = 57892 bytes (17174 bytes = 22.88% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-devel/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 52681 bytes
Input file size = 52831 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39388
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39388
Output IDAT size = 39388 bytes (13293 bytes decrease)
Output file size = 39466 bytes (13365 bytes = 25.30% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'consistencychecking-3.Rmd' using rmarkdown
--- finished re-building 'consistencychecking-3.Rmd'
--- re-building 'dataexploration-1.Rmd' using rmarkdown
--- finished re-building 'dataexploration-1.Rmd'
--- re-building 'mbnmatime-overview.Rmd' using rmarkdown
--- finished re-building 'mbnmatime-overview.Rmd'
--- re-building 'outputs-4.Rmd' using rmarkdown
--- finished re-building 'outputs-4.Rmd'
--- re-building 'predictions-5.Rmd' using rmarkdown
--- finished re-building 'predictions-5.Rmd'
--- re-building 'runmbnmatime-2.Rmd' using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building 'runmbnmatime-2.Rmd'
SUMMARY: processing the following file failed:
'runmbnmatime-2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33676 bytes
Input file size = 33802 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
Output IDAT size = 26019 bytes (7657 bytes decrease)
Output file size = 26097 bytes (7705 bytes = 22.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79747 bytes
Input file size = 79933 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
Output IDAT size = 57953 bytes (21794 bytes decrease)
Output file size = 58031 bytes (21902 bytes = 27.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 89327 bytes
Input file size = 89525 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65638
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65638
Output IDAT size = 65638 bytes (23689 bytes decrease)
Output file size = 65716 bytes (23809 bytes = 26.59% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 91743 bytes
Input file size = 91953 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66621
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66621
Output IDAT size = 66621 bytes (25122 bytes decrease)
Output file size = 66699 bytes (25254 bytes = 27.46% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20041 bytes
Input file size = 20143 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17156
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17156
Output IDAT size = 17156 bytes (2885 bytes decrease)
Output file size = 17234 bytes (2909 bytes = 14.44% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 58443 bytes
Input file size = 58605 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42592
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42592
Output IDAT size = 42592 bytes (15851 bytes decrease)
Output file size = 42670 bytes (15935 bytes = 27.19% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81697 bytes
Input file size = 81883 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61949
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61949
Output IDAT size = 61949 bytes (19748 bytes decrease)
Output file size = 62027 bytes (19856 bytes = 24.25% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 67350 bytes
Input file size = 67524 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53335
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53335
Output IDAT size = 53335 bytes (14015 bytes decrease)
Output file size = 53413 bytes (14111 bytes = 20.90% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31358 bytes
Input file size = 31472 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24223
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24223
Output IDAT size = 24223 bytes (7135 bytes decrease)
Output file size = 24301 bytes (7171 bytes = 22.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 74798 bytes
Input file size = 74984 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57687
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57687
Output IDAT size = 57687 bytes (17111 bytes decrease)
Output file size = 57765 bytes (17219 bytes = 22.96% decrease)
** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 51519 bytes
Input file size = 51669 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 38688
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 38688
Output IDAT size = 38688 bytes (12831 bytes decrease)
Output file size = 38766 bytes (12903 bytes = 24.97% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.2.4
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘consistencychecking-3.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-1.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19052 bytes
Input file size = 19154 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14912
Output IDAT size = 14912 bytes (4140 bytes decrease)
Output file size = 14990 bytes (4164 bytes = 21.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-8-2.png
672x240 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33676 bytes
Input file size = 33802 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26019
Output IDAT size = 26019 bytes (7657 bytes decrease)
Output file size = 26097 bytes (7705 bytes = 22.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/consistencychecking-3_files/figure-html/unnamed-chunk-11-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31267 bytes
Input file size = 31381 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25404
Output IDAT size = 25404 bytes (5863 bytes decrease)
Output file size = 25482 bytes (5899 bytes = 18.80% decrease)
--- finished re-building ‘consistencychecking-3.Rmd’
--- re-building ‘dataexploration-1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-1-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19072 bytes
Input file size = 19174 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16320
Output IDAT size = 16320 bytes (2752 bytes decrease)
Output file size = 16398 bytes (2776 bytes = 14.48% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119981 bytes
Input file size = 120227 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 88771
Output IDAT size = 88771 bytes (31210 bytes decrease)
Output file size = 88849 bytes (31378 bytes = 26.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25739 bytes
Input file size = 25853 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19919
Output IDAT size = 19919 bytes (5820 bytes decrease)
Output file size = 19997 bytes (5856 bytes = 22.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 131032 bytes
Input file size = 131290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 94428
Output IDAT size = 94428 bytes (36604 bytes decrease)
Output file size = 94506 bytes (36784 bytes = 28.02% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 79747 bytes
Input file size = 79933 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57953
Output IDAT size = 57953 bytes (21794 bytes decrease)
Output file size = 58031 bytes (21902 bytes = 27.40% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/obese.time-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64122 bytes
Input file size = 64284 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 45061
Output IDAT size = 45061 bytes (19061 bytes decrease)
Output file size = 45139 bytes (19145 bytes = 29.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/dataexploration-1_files/figure-html/pain.binplot-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 87043 bytes
Input file size = 87241 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65660
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 65660
Output IDAT size = 65660 bytes (21383 bytes decrease)
Output file size = 65738 bytes (21503 bytes = 24.65% decrease)
--- finished re-building ‘dataexploration-1.Rmd’
--- re-building ‘mbnmatime-overview.Rmd’ using rmarkdown
--- finished re-building ‘mbnmatime-overview.Rmd’
--- re-building ‘outputs-4.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 91539 bytes
Input file size = 91749 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66554
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 66554
Output IDAT size = 66554 bytes (24985 bytes decrease)
Output file size = 66632 bytes (25117 bytes = 27.38% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21360 bytes
Input file size = 21462 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17537
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17537
Output IDAT size = 17537 bytes (3823 bytes decrease)
Output file size = 17615 bytes (3847 bytes = 17.92% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 58724 bytes
Input file size = 58886 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42237
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42237
Output IDAT size = 42237 bytes (16487 bytes decrease)
Output file size = 42315 bytes (16571 bytes = 28.14% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/outputs-4_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81674 bytes
Input file size = 81860 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61858
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61858
Output IDAT size = 61858 bytes (19816 bytes decrease)
Output file size = 61936 bytes (19924 bytes = 24.34% decrease)
--- finished re-building ‘outputs-4.Rmd’
--- re-building ‘predictions-5.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 67056 bytes
Input file size = 67230 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52975
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 52975
Output IDAT size = 52975 bytes (14081 bytes decrease)
Output file size = 53053 bytes (14177 bytes = 21.09% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-7-1.png
672x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31182 bytes
Input file size = 31296 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24122
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24122
Output IDAT size = 24122 bytes (7060 bytes decrease)
Output file size = 24200 bytes (7096 bytes = 22.67% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 74916 bytes
Input file size = 75102 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57760
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 57760
Output IDAT size = 57760 bytes (17156 bytes decrease)
Output file size = 57838 bytes (17264 bytes = 22.99% decrease)
** Processing: /home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/MBNMAtime.Rcheck/vign_test/MBNMAtime/vignettes/predictions-5_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 56193 bytes
Input file size = 56343 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42206
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42206
Output IDAT size = 42206 bytes (13987 bytes decrease)
Output file size = 42284 bytes (14059 bytes = 24.95% decrease)
--- finished re-building ‘predictions-5.Rmd’
--- re-building ‘runmbnmatime-2.Rmd’ using rmarkdown
Quitting from lines 122-123 [unnamed-chunk-3] (runmbnmatime-2.Rmd)
Error: processing vignette 'runmbnmatime-2.Rmd' failed with diagnostics:
non-numeric argument to mathematical function
--- failed re-building ‘runmbnmatime-2.Rmd’
SUMMARY: processing the following file failed:
‘runmbnmatime-2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64