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PAML: Phylogenetic Analysis by Maximum Likelihood

PAML is a package of programs for phylogenetic analyses of DNA or
protein sequences using maximum likelihood. PAML is not good for tree
making. It may be used to estimate parameters and test hypotheses to
study the evolutionary process, when you have reconstructed trees
using other programs such as PAUP*, PHYLIP, MOLPHY, PhyML, RaxML, etc.

Notes about running of PAML programs and the package:

- Example datasets are included in /usr/share/paml/examples
- Control files for PAML programs are in /usr/share/paml
- Additional executables are placed in /usr/libexec/paml

Suggested citation:
Yang, Z. 2007. PAML 4: a program package for phylogenetic analysis by
maximum likelihood. Molecular Biology and Evolution 24: 1586-1591

 Name                                                       Last modified      Size  
 Parent Directory                                                                -   
 LICENSE                                                    04-Jun-2022 07:30  188   
 MCMCtree.Tutorials.pdf                                     04-Jun-2022 07:30  527K  
 README                                                     04-Jun-2022 07:30  780   
 References                                                 04-Jun-2022 07:30  344   
 paml.SlackBuild                                            11-Mar-2022 06:34  6.0K  
 paml.info                                                  04-Jun-2022 07:30  412   
 paml4.9j.tgz                                               04-Jun-2022 07:30  6.1M  
 slack-desc                                                 04-Jun-2022 07:30  1.0K  

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